BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027G08SP1|AL428784
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig484 1189 0.0
>3x_Contig484
Length = 1849
Score = 1189 bits (600), Expect = 0.0
Identities = 600/600 (100%)
Strand = Plus / Minus
Query: 1 ttgcaggccagaaagctaaaacaatccattgatatcattgatcatcttaagataccagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttgcaggccagaaagctaaaacaatccattgatatcattgatcatcttaagataccagac 541
Query: 61 ttcattgacttaggcaggtccaaagtggaggataatgcattttacatcgattttaagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttcattgacttaggcaggtccaaagtggaggataatgcattttacatcgattttaagttt 481
Query: 121 gttgatttcgaaaacattttagcgtcaccggataaggaactcctaaattgtaaattaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gttgatttcgaaaacattttagcgtcaccggataaggaactcctaaattgtaaattaggg 421
Query: 181 tactacttactcattatgaaaatcataactcagaaaattctatttattcctttaccgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tactacttactcattatgaaaatcataactcagaaaattctatttattcctttaccgcat 361
Query: 241 gctctatcattcatgggaagcaattctttagttgatggtgaactaccattttatgcacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gctctatcattcatgggaagcaattctttagttgatggtgaactaccattttatgcacta 301
Query: 301 acaaaagcaaaccaacagcataatagtaagttaaaaatggcaactgcaaggttcaatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 acaaaagcaaaccaacagcataatagtaagttaaaaatggcaactgcaaggttcaatata 241
Query: 361 aacgtcaatcagctcaggcagtatatggaacaccatcgctgattagtttttgatgatcga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aacgtcaatcagctcaggcagtatatggaacaccatcgctgattagtttttgatgatcga 181
Query: 421 aagtgttttccggagaaccattaagtcgtttccacgaatatatatctttctttagcgcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 aagtgttttccggagaaccattaagtcgtttccacgaatatatatctttctttagcgcat 121
Query: 481 ctatctcatataccctaatacgtctttctgtacctccgtacccagcataacctccttctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctatctcatataccctaatacgtctttctgtacctccgtacccagcataacctccttctc 61
Query: 541 cagctgcacctccatagcataaccatatcttgtcctcaccgtcgttgaaatcatctaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cagctgcacctccatagcataaccatatcttgtcctcaccgtcgttgaaatcatctaata 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6119
Number of Sequences: 1807
Number of extensions: 6119
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)